Insertion junction: CLIP2.015435_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015435
Chromosome:chromosome 3
Location:1830978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154300 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTAGCACTCGGAGCACAGGGGCACATGATACAGGTAGAGGGCTGTAGG
Internal bar code:GTGAATAGGACTGGAGAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCACTTAGGCTGCACGTC
Suggested primer 2:TCTCGGGTGCTGTATGGAGA