Insertion junction: CLIP2.015442_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015442
Chromosome:chromosome 1
Location:3106026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019750 (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTTGCGAGGGGTTCACGGGGGGCCTGCACTGCCAACACGCAGGAGG
Internal bar code:ACGAAGTGTACTAACTTATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCGCGTTCATTCGTCCC
Suggested primer 2:GTTGGCGGTGTGTGTGTTAC