Insertion junction: CLIP2.015445_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015445
Chromosome:chromosome 10
Location:1127284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425501 (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTATGGTTGTGTGTACATGATACGGTGCAAAGCTGCCCAGTGCGCCG
Internal bar code:AAAATTAGCGGATTATCACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACAACTTGAACGACCC
Suggested primer 2:CCCTCCCCTCTGACATCTGA