Insertion junction: CLIP2.015448_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015448
Chromosome:chromosome 7
Location:4898833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346500 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTTTCGGGGGTGGTTTCGACCTGGTTTCGACCTGGTTTCGACCCGA
Internal bar code:CAGCTCGTTAACTTTTGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACATCCCATTCCTCGT
Suggested primer 2:GAATCCGATTCACATGCGGC