Insertion junction: CLIP2.015455_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015455
Chromosome:chromosome 17
Location:4334629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730250 PIT,PIT1 (1 of 1) PTHR12175//PTHR12175:SF2 - AD039 HT014 THIOREDOXIN FAMILY TRP26 // SUBFAMILY NOT NAMED; Proteasome-interacting thioredoxin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTCAACGTGGCGGAGATCAAGAAGCAGGAGGACAAGTGATGAAATAA
Internal bar code:CATGCGGGGTCACATGGCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4204
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGTGGCAGACTTCGAC
Suggested primer 2:GGAGTATGGGTGCGGGTATG