Insertion junction: CLIP2.015477_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015477
Chromosome:chromosome 14
Location:3396986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g629960 (1 of 2) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAAAACGACGTGTCTCTCTACAGTGTACAGTTAGAACCTTGTGAGCG
Internal bar code:GGCGCGGCTCCATAATGATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3406
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGCAGTAGCAGAGGCAG
Suggested primer 2:GACAGTAGCCACGGCAGTAG