Insertion junction: CLIP2.015488_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015488
Chromosome:chromosome 1
Location:6766215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048350 EBM1,CGL53 (1 of 4) K19355 - mannan endo-1,4-beta-mannosidase (MAN); conserved protein with glycosyl hydrolase family 5 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCGGCAGTTAGCAAGACAAGCATTTGTCGCGACGACGGGTCACGCAG
Internal bar code:AGCGTTGGTCCTCAGTTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAACCTCACAGTCCTCC
Suggested primer 2:CTAGCTCCCAGCCCATGATG