Insertion junction: CLIP2.015489_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015489
Chromosome:chromosome 6
Location:7980747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304550 PAN2,PAR1 (1 of 1) K12571 - PAB-dependent poly(A)-specific ribonuclease subunit 2 (PAN2); Poly(A)-ribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGATCCATCATGCAGCAATCACAGTGAGGTTTGCATCGGGTCCGCCCC
Internal bar code:AGTTTGATTCTTACGGGCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTAACCCCTATCGTACGC
Suggested primer 2:CGAAAGGACAGCAGGAGTGT