Insertion junction: CLIP2.015493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015493
Chromosome:chromosome 10
Location:1465449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428400 PUS7 (1 of 2) 5.4.99.24 - 23S rRNA pseudouridine(955/2504/2580) synthase; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACAGCCGCGGCAGTCGGGGCGCATCAGGTGCGGGGTGGGCTGGGTG
Internal bar code:GGTGTTGCATAATGAAATGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4604
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACTTGGAAGGGGAGGTG
Suggested primer 2:TGGAGGTCAGGAATCGAGGT