Insertion junction: CLIP2.015504_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015504
Chromosome:chromosome 6
Location:5806726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289033 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGGCCGCAGGCATCCCGCAGCCCCCGTCCATGTGGCTAGTAGACCT
Internal bar code:AGACTTCTCGTCCTCAGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCGTTTCAGCGTTACGA
Suggested primer 2:ACATGAAGGGCCATCAAGGG