Insertion junction: CLIP2.015507_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015507
Chromosome:chromosome 1
Location:1428717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007600 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCACGGTTGGTTGAATGTCATCATGCCCTGGGTCCTGTTACCCCCC
Internal bar code:CTAGCGCTCTTCCCTGCGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACTCACACACACCGCGT
Suggested primer 2:CGCGCTAACATGTTCCTTCG