Insertion junction: CLIP2.015516_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015516
Chromosome:chromosome 17
Location:746542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701100 CPK8 (1 of 1) 2.7.1.83 - Pseudouridine kinase; putative carbohydrate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCTCAGCCGCCGCAGCGAGGCTGTGAGGAAGGCTCCGGCCGTGTCG
Internal bar code:CGCGTACGGCCGTCAACTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCACAAGGGTTTTGCTC
Suggested primer 2:TCGCTCTGTCTGTCTCCTGA