Insertion junction: CLIP2.015517_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015517
Chromosome:chromosome 14
Location:120829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g608350 (1 of 6) PTHR13339:SF0 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTCCTGCTACGGATGCTGTGGCCGGCGGCGGCGACCGGGCCACCAG
Internal bar code:GACTCCCTTAATTACATACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2037
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCAGTTCACTTACCCG
Suggested primer 2:TGATGTGGTCGCTGACTGAC