Insertion junction: CLIP2.015530_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015530
Chromosome:chromosome 6
Location:4222986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278245 PAO9,PAO5 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCTTGAATCATTGAAGCCTACCTCCTCCTCCGCCTCCTCCTCCTCG
Internal bar code:GCTTATGTTCTGTGCAGCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCCTCTCTCCCCTTCAC
Suggested primer 2:ATCAGAGCAGTTCGTGTGGG