Insertion junction: CLIP2.015533_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015533
Chromosome:chromosome 2
Location:5965131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118125 5'UTR
Cre02.g118151 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGCCCTACACTTACACCATGCAGCGCCTGGAGGGCCTCGATCTGGG
Internal bar code:GTAAATAATACCAATGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGTTGTGGCATCCCAT
Suggested primer 2:AGGAAATGTCGCCAGACCAG