Insertion junction: CLIP2.015537_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015537
Chromosome:chromosome 9
Location:4728715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402182 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTGCGCATGTATGGCTGCGCATGTGTGGCTGCGCATGTACGGCTGC
Internal bar code:TAGGTGGTTAAGTGGAGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGGTCA
Suggested primer 2:GCACAGCAGACACCACTTTG