Insertion junction: CLIP2.015538_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015538
Chromosome:chromosome 2
Location:316601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCCGGCCTGTGCTGTGTGCCCTGTGTCAGACGACCAGCCCGCGCTG
Internal bar code:GTGCGTTGTCTCTCATGGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2112
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACCTATCTCGCTCGTG
Suggested primer 2:TTGCAGGCACATCATCCCAT