Insertion junction: CLIP2.015539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015539
Chromosome:chromosome 6
Location:3890269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278187 MOT4 (1 of 1) K15716 - E3 ubiquitin-protein ligase ZSWIM2 [EC:6.3.2.19] (ZSWIM2); Predicted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTGAGGGACCTGCAGGGGGACCTGTGGGGGACCTGAGGGGGACCTG
Internal bar code:TTTCCTAAGCGGGGTTAGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1385
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAATGCCAAAGGTGCAGG
Suggested primer 2:TCGCTGTTCGTGATGGTCAA