Insertion junction: CLIP2.015540_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015540
Chromosome:chromosome 6
Location:3991916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278208 (1 of 1) PF04845 - PurA ssDNA and RNA-binding protein (PurA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGCTAGTGGCCCACGCACGCACGCACCGGCATGCCCGTCTGGCCGA
Internal bar code:GTATTAGAACAAGAAACTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4434
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCACATGCATGGTGATC
Suggested primer 2:GCTGATTGCCTCCTGGAACT