Insertion junction: CLIP2.015542_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015542
Chromosome:chromosome 11
Location:841905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467642 (1 of 2) PTHR27000:SF119 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2-RELATED 5'UTR_intron
Cre11.g467643 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAGAGCGTCCACAGGCGGCGGCCCGAGGGGACCGCGCCGGTGCCGGG
Internal bar code:TAACTCTGTTACTTTTATGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2369
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGATGGTTTTGGGTCAG
Suggested primer 2:GAACATGCTGCGGTTGTTGT