Insertion junction: CLIP2.015551_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015551
Chromosome:chromosome 1
Location:1765485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009731 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACGTCATCCTCATCGCAACCTCTGTCATCCTCCAGTCCTGCTGCCCA
Internal bar code:TCGGTTGGAGTTCAGATGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1852
LEAP-Seq percent confirming:19.7183
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGACTCTTGCACTGACA
Suggested primer 2:TGTTGGTGCTGGTGTTGGT