Insertion junction: CLIP2.015551_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015551
Chromosome:chromosome 1
Location:1765486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009731 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGACATGGCTGGAGGTCTGCAGGGCGATTGTGGCGGAGCCGGGATG
Internal bar code:TCGGTTGGAGTTCAGATGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGTGCTGGTGTTGGT
Suggested primer 2:GACCGACTCTTGCACTGACA