Insertion junction: CLIP2.015559_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015559
Chromosome:chromosome 9
Location:931329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403000 PAP9 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCTTTCTGTGCTCCTGCTCCCGTCCCACTCCGCCTTTCCTCAACTC
Internal bar code:TAGGTAAAGGACGATCTGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCTGTTCAAACCCTCC
Suggested primer 2:ATGACTATGCCCGACCCTCC