Insertion junction: CLIP2.015560_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015560
Chromosome:chromosome 12
Location:4632873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522100 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCGTGCGCGTTCTTGGCGTACACGAAGTTGATCTTGGTCTTGGTGA
Internal bar code:ATTGGACACATGTCTATGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTATGTCTCTCGCCCG
Suggested primer 2:CAGGGTGAGAGTGGAAGCAG