Insertion junction: CLIP2.015560_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015560
Chromosome:chromosome 12
Location:4632882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522100 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTCGACCTGCACGTGAGTGGCCGGGTGCCAGCCTACCAGGTCCATGG
Internal bar code:ATTGGACACATGTCTATGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1997
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTGAGAGTGGAAGCAG
Suggested primer 2:GTGTCTATGTCTCTCGCCCG