Insertion junction: CLIP2.015562_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015562
Chromosome:chromosome 4
Location:499738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217928 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGGAGGCGGCGGCGGTGCTGGCGGTTCAGGCGCTGGACTCGCGGCA
Internal bar code:CCCATTATTATCCAGTAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4098
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGCACGAGAGGAAGGC
Suggested primer 2:GCGGATCCAGGAGGCTATTC