Insertion junction: CLIP2.015566_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015566
Chromosome:chromosome 17
Location:2412633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714450 KUP3 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCAGGAAGTGGATGAGCACGTGCGGCAGCCCCACCGGCGTCTCGCTG
Internal bar code:TGCATTCAGGCTAACTGTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACTTCCAACCTGCACA
Suggested primer 2:GGAGTTCAACACGCAACACC