Insertion junction: CLIP2.015575_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015575
Chromosome:chromosome 4
Location:4069019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g233202 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCGTGCCAACGGAAGGATCATACACGACACCATTGTGAAAGGCCGTC
Internal bar code:TTGGCGGCGCAGTGAGGTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3222
LEAP-Seq percent confirming:98.7805
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCATTGCACTATCTTGC
Suggested primer 2:GAAAGCCAGCGCGTGAATAG