Insertion junction: CLIP2.015578_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015578
Chromosome:chromosome 1
Location:6461370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045640 (1 of 1) PTHR10584//PTHR10584:SF190 - SUGAR KINASE // RIBOKINASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCGCTAGGGGAAGTGACGGGGAAAAAGCTTCGACACCGTGTGTAGGT
Internal bar code:TGAGACCCATTCTTATAGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATCTCGACACCCAGGA
Suggested primer 2:GAGTCTGTAATCGGGGAGCG