Insertion junction: CLIP2.015579_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015579
Chromosome:chromosome 7
Location:2184918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327050 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAGCATCGTGGCTGCGCATGGCTGGGCCGCACGCGCACTCGCCGCAG
Internal bar code:CTGTGCGGATAAGGCATATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2209
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCCACCAGAGAGATGA
Suggested primer 2:GGGGGTTGTAAGTACCGGTG