Insertion junction: CLIP2.015583_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015583
Chromosome:chromosome 10
Location:5693427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459350 OPR49,RAP5 OctotricoPeptide Repeat protein 49; (1 of 2) IPR000104//IPR013584 - Antifreeze protein, type I // RAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACGGTATTGGCATGAGTCGCATGACATAGCAACATAATTAGGAGGTC
Internal bar code:TGATGCACGATATTTAAGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAGACGGGAGAGGGGAT
Suggested primer 2:AACGCAGACGACACAAAACG