Insertion junction: CLIP2.015583_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015583
Chromosome:chromosome 13
Location:3761799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588736 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGGTCACGGCGCGCCTGCTCTGCAAGGAGGCACGTAGTGGGTTTGC
Internal bar code:TCTTTACGAAAATCTTCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGATCTGTTGCTGCTGCT
Suggested primer 2:CAACCCCAAGGAAAGCAAGC