Insertion junction: CLIP2.015595_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015595
Chromosome:chromosome 1
Location:4161437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027764 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCTCATCCTGCAGCGGGCGCTGCTGATCTGCTGGGCCGCCTGCATC
Internal bar code:AGTGGGATCGTCCGATTGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCCACTCACTGGTACAC
Suggested primer 2:AAACCTTCCGCATCTCCCTG