Insertion junction: CLIP2.015597_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015597
Chromosome:chromosome 13
Location:2051588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576740 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGGCTGCGCTGGGCGCCGGCTGGCGGGCTGGCGTTGGGACTACCG
Internal bar code:TGCACTCCATTGAATGTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAATTGAGGGTGGGGAG
Suggested primer 2:CATTCCAACCCGTCTGCTCT