Insertion junction: CLIP2.015598_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015598
Chromosome:chromosome 13
Location:3916588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589940 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCAGGGGAGGGGGCTGCTGGGATGGTAGGAGCGCTCGGGGAGTTGGG
Internal bar code:TCAAAGTGATTCACTTTCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1929
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCCACTCAGGGGTGTC
Suggested primer 2:GTGTTCGCCAGCATTCGATC