Insertion junction: CLIP2.015604_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015604
Chromosome:chromosome 15
Location:1255892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801725 NCL64 Nuclear Control of chloroplast-Like 64; (1 of 39) PF08373 - RAP domain (RAP) 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTACAGTTCGCACGCGCCAGCGCCACAGCGAGTAGACATGGCTTAGGC
Internal bar code:CACGTATGCGTAGAGAAGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:151
LEAP-Seq percent confirming:5.45455
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCTAGCCTAACCTCTCA
Suggested primer 2:GCTCCCCTGTTAATGCTGGT