Insertion junction: CLIP2.015608_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015608
Chromosome:chromosome 13
Location:931323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568025 (1 of 1) PF08991 - Mature-T-Cell Proliferation I type (MTCP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCCACAACCGCCAGGCGAGCCGTACAGTCCAACCGCTCGCATGCG
Internal bar code:GAAAACGGGATGGGTCGCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3142
LEAP-Seq percent confirming:95.7143
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGCGCATAGTACCGGTA
Suggested primer 2:AACGGAAAGGCTAGAAGGGC