Insertion junction: CLIP2.015611_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015611
Chromosome:chromosome 2
Location:4700429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108100 (1 of 1) PTHR12147//PTHR12147:SF22 - FXNA-RELATED // ENDOPLASMIC RETICULUM METALLOPEPTIDASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCACAGCTCCCAGAATGGAGACTCCGATTCATGGCTGAAACGCACCA
Internal bar code:GATCTGAGTGACGCCGAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTCTCTAGGCACGCT
Suggested primer 2:CCACACGAAGCAACACTGTG