Insertion junction: CLIP2.015614_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015614
Chromosome:chromosome 4
Location:3661535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228850 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGTGGCCGCTGGAGCTTGAATGGCGGCGGCGGCGGCGGGGCGGGCGC
Internal bar code:GGCCCGTCAGGCTGCGTTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GACACGTACACATCCTCCCC
Suggested primer 2:TGCCTGCCTCTGTTTCTCTG