Insertion junction: CLIP2.015615_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015615
Chromosome:chromosome 2
Location:5968130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118200 (1 of 3) PF01940 - Integral membrane protein DUF92 (DUF92) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCGCCCGCCCTCCTTGTGCTCCTCCTCCACCTGAGCTTTGCGCTTG
Internal bar code:TCAATGTACTGTGGCCCTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1901
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGGCGACGCTAATTCT
Suggested primer 2:ATCATCGGTACCGTTCGCTC