Insertion junction: CLIP2.015618_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015618
Chromosome:chromosome 10
Location:3891276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446400 VPS4,KATL1,KAT3,KAT2 (1 of 1) PTHR23074//PTHR23074:SF78 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2; Katanin like protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATCACTTCGCGCATGCAGCGCCGACAGGCGCCCCTTCCCTCAGATCC
Internal bar code:TACGCGAGCTATCATTCTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:6021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCCAGTTTGAACGTG
Suggested primer 2:CTGTAGTGAGGGGTTGGCAG