Insertion junction: CLIP2.015639_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015639
Chromosome:chromosome 16
Location:7066456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674852 HAP2,GCS1 (1 of 1) PF10699 - Male gamete fusion factor (HAP2-GCS1); Generative cell specific-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGCGGCTTAGTGCTATGTTTGCCCTTTTCCTTGTCCACTTCCTTC
Internal bar code:CCACGTTTTCGGTGTTGGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTATGTGAAGTGTGGCA
Suggested primer 2:CATACTGATTGGCCGCAAGC