Insertion junction: CLIP2.015644_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015644
Chromosome:chromosome 12
Location:4773745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523250 MAE15 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACACGCCCGGTCTCGGGCGATCCGTTTGCTCTTATAACACACGCGC
Internal bar code:GTTTGGTGTTTGACGACTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAACCGCAGACCTGTG
Suggested primer 2:TCAGTGGCTGCAGAAGTGAG