Insertion junction: CLIP2.015667_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015667
Chromosome:chromosome 9
Location:2729571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGGTTGATAAGAAAGAAGGTACAGGAGGGGGAGGCCGAGGTGGGAG
Internal bar code:AGGAGTACGAGTGTGGGGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGACAGTAACGGCCTCGA
Suggested primer 2:GGGCTGGAAGAAGCAAGGAT