Insertion junction: CLIP2.015670_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015670
Chromosome:chromosome 13
Location:865789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567400 PDE16 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGAAATTACCTCGCATACCTTGCCTGTGTGTGCGCATCAACCTTACC
Internal bar code:ACTATGGAACTGGAGCTAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAAAGTTCTCGTTTGCG
Suggested primer 2:ACTGCCTTCATCTCGCACAA