Insertion junction: CLIP2.015672_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015672
Chromosome:chromosome 12
Location:5073552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525600 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTGCTGCCCCTGCCGCCTCCGCGTCCGCGTCCGCTGCGCGTCTCCA
Internal bar code:TTTTGCAGGCGAGTTTGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTTTTGATGCTGTCGTT
Suggested primer 2:GTGTGTGTGTGTGTACGTGC