Insertion junction: CLIP2.015673_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015673
Chromosome:chromosome 10
Location:1559809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428950 (1 of 1) PTHR11019//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGGTCGTTGGCGTAGAAGGCGAATCCCTGGGAGTCGGCTGGGCCCT
Internal bar code:TCGGAATGCGACAGAGAGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGTGCAGTTGTGTTGC
Suggested primer 2:TGTTGACATCCAGCATCCCC