Insertion junction: CLIP2.015673_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015673
Chromosome:chromosome 10
Location:1559811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428950 (1 of 1) PTHR11019//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCCCTGGTGCGTGCGTGCCTCTTCGTCCCTCCTACTGCCGGCCGTG
Internal bar code:TCGGAATGCGACAGAGAGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4937
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGACATCCAGCATCCCC
Suggested primer 2:CTCCTGTGCAGTTGTGTTGC