Insertion junction: CLIP2.015677_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015677
Chromosome:chromosome 1
Location:4465485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030550 UBX1 (1 of 1) PTHR13020:SF34 - UBX DOMAIN-CONTAINING PROTEIN 4; possible ubiquitin-proteasome pathway protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGTGATATGCAGGTCCGAGTGGTCATGACGTCATAGCGTCAAGACA
Internal bar code:CATGGAGGGGCCAATTGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCGATCGCAAATTCGTC
Suggested primer 2:CCCTACCAAGACCTCCGAGA