Insertion junction: CLIP2.015694_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015694
Chromosome:chromosome 11
Location:3520024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477700 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAATGAGGCCCGCTGGTAGGTACTGCAGGGCTCCTATCTTAATGTCGC
Internal bar code:TAGGCGTTACTGCTTATTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1924
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGACTGGTCATATCGGGG
Suggested primer 2:TGTACAGCTGAGCACACCTG